The detailed information of tRNA gene sequence


Sequence ID>WENV170664897
Genome IDJYMV01020812
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 4058
End posion on genome 4143
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataatattca
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGAACGAAAGTTCCGT
GGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ctcagaggca
Secondary structure (Cloverleaf model)
>WENV170664897	Ser	TGA
                   a      GCCA ctcagaggca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGAACGAAAGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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