The detailed information of tRNA gene sequence


Sequence ID>WENV170664920
Genome IDJYMV01020959
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2705
End posion on genome 2795
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acaaagagaa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGCTCCCCTGCTAAGGGAGTATACGTTTATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gactctctaa
Secondary structure (Cloverleaf model)
>WENV170664920	Ser	GCT
                   a      GCCA gactctctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACGTTTATAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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