The detailed information of tRNA gene sequence


Sequence ID>WENV170665165
Genome IDJYMV01023257
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 25598
End posion on genome 25523
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
accgtttccc
tRNA gene sequence
GGGGCCATAGCTCAGCTGGGAGAGCGCAACACTGGCAGTGTTGAGGTCAGCGGTTCGATC
CCGCTTGGCTCCACCA
Downstream region at tRNA end position
tatttgtaaa
Secondary structure (Cloverleaf model)
>WENV170665165	Ala	GGC
                   c      ACCA tatttgtaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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