The detailed information of tRNA gene sequence


Sequence ID>WENV170665170
Genome IDJYMV01023283
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 18113
End posion on genome 18188
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGGCTCGTGGTCTAGGGGTTATGATGTCGCCTTCACACGGCGAAGATCGCAGGTTCAAAT
CCTGCCGAGCCCACCA
Downstream region at tRNA end position 
ctcatccctt
Secondary structure (Cloverleaf model)
>WENV170665170	Val	CAC
                   c      ACCA ctcatccctt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
      G G A        G      | | | | |     A
    G       T C T G       G C A G G     C
    G         | | +                 T T
    T       T G A T
      T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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