The detailed information of tRNA gene sequence


Sequence ID>VRL0100102
Genome IDDQ517337
Search identical group
Phylum/ClassAscoviridae
SpeciesTrichoplusia ni ascovirus 2c
Start position on genome 86653
End posion on genome 86581
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aacaataaga
tRNA gene sequence 
AGTCCGTTAGCTCAGTGGTTAGAGCATCGTGCTGATAACACGAGGGTCGTAGGTTCAAAT
CCTACATGGACTAtac
Downstream region at tRNA end position 
ttttgaaatg
Secondary structure (Cloverleaf model)
>VRL0100102	Ile	GAT
                   a      Atac ttttgaaatg
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     G + T
                     T - A          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T A G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    T - A
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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