The detailed information of tRNA gene sequence


Sequence ID>WENV170665211
Genome IDJYMV01023550
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 182
End posion on genome 258
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggagacatca
tRNA gene sequence 
GGGCGATTGGTGTAGTCTGGATATCATGCTGGCCTTCTAAGCCGGTGACACGGGTTCGAA
TCCTGTATCGCCTACCA
Downstream region at tRNA end position 
ttcctcgcgg
Secondary structure (Cloverleaf model)
>WENV170665211	Arg	TCT
                   a      ACCA ttcctcgcgg
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
    C T G A        G      | | + | |     G
  T         T G T G       A C G G G     C
  G           | | +                 T T
  G         T C A T
    A T A          G     TGAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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