The detailed information of tRNA gene sequence


Sequence ID>WENV170665393
Genome IDJYMV01025699
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 14018
End posion on genome 14091
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agattcgaaa
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGATC
CCTGCCACTCCTGCan
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170665393	Trp	CCA
                   a      GCan nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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