The detailed information of tRNA gene sequence


Sequence ID>WENV170665505
Genome IDJYMV01027012
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5539
End posion on genome 5614
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atcttctttT
tRNA gene sequence 
GGGGACGTAGGTTAGCTTGGTATACTGCCAGCCTCGGGCGCTGGAGATCATGGGTTCAAC
TCCCACCGTCCCCATtt
Downstream region at tRNA end position 
tcattcaatc
Secondary structure (Cloverleaf model)
>WENV170665505	Pro	CGG
                   T      ATtt tcattcaatc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T C
                    T     C A C C C     A
      C G A        A        | | | |     A
    T       T T G G       A T G G G     C
    T         | | +                 T T
    G       T A C T
      G T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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