The detailed information of tRNA gene sequence


Sequence ID>WENV170665559
Genome IDJYMV01027621
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1181
End posion on genome 1107
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agtaattttt
tRNA gene sequence 
GGGATCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGATCCCGCtc
Downstream region at tRNA end position 
ctctaaaacc
Secondary structure (Cloverleaf model)
>WENV170665559	Asp	GTC
                   t      GCtc ctctaaaacc
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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