The detailed information of tRNA gene sequence


Sequence ID>WENV170665582
Genome IDJYMV01028042
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1253
End posion on genome 1177
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtccttttat
tRNA gene sequence 
CGGGGTATAGCGCAGTCTGGTAGCGCGCTTGCTTTGGGAGCAAGATGTCGGGAGTTCAAA
TCTCTCTACCCCGACCA
Downstream region at tRNA end position 
atttttattt
Secondary structure (Cloverleaf model)
>WENV170665582	Pro	TGG
                   t      ACCA atttttattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C T C     A
      T G A        A      | + | | |     A
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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