The detailed information of tRNA gene sequence


Sequence ID>WENV170665636
Genome IDJYMV01028818
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1623
End posion on genome 1699
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacctttaaa
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCTACGTTCACATCGTAGAAGTCGGGGGTTCAAA
TCCCTCATCGCCCACTA
Downstream region at tRNA end position 
tgaacttgag
Secondary structure (Cloverleaf model)
>WENV170665636	Val	CAC
                   a      ACTA tgaacttgag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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