The detailed information of tRNA gene sequence


Sequence ID>WENV170665721
Genome IDJYMV01029718
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 15642
End posion on genome 15729
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agaacttttc
tRNA gene sequence 
GGAGAGGTGGCAGAGTCCGGTCGAATGTACCGCACTCGAAATGCGGCGTACCGCAAGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170665721	Ser	CGA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G           | | +                 T T
  G         A T G T
    T C G A        A     CGTACCGCAAGGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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