The detailed information of tRNA gene sequence


Sequence ID>WENV170665795
Genome IDJYMV01030298
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 551
End posion on genome 626
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggttaaat
tRNA gene sequence 
GGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
gagatgaata
Secondary structure (Cloverleaf model)
>WENV170665795	Trp	CCA
                   t      GCCA gagatgaata
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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