The detailed information of tRNA gene sequence


Sequence ID>WENV170665860
Genome IDJYMV01030963
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 326
End posion on genome 235
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcacatattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCGGCACCCTGCTAAGGTGTTTTAGGTGAAATATCC
TAACGTGGGTTCGAATCCCACCCTCTCCGCAA
Downstream region at tRNA end position 
aatttttatt
Secondary structure (Cloverleaf model)
>WENV170665860	Ser	GCT
                   t      GCAA aatttttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTAGGTGAAATATCCTAAC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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