The detailed information of tRNA gene sequence


Sequence ID>WENV170665924
Genome IDJYMV01031506
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 901
End posion on genome 817
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actgattttt
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGTGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGCtt
Downstream region at tRNA end position 
gttatttccc
Secondary structure (Cloverleaf model)
>WENV170665924	Ser	TGA
                   t      GCtt gttatttccc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGTGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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