The detailed information of tRNA gene sequence


Sequence ID>WENV170665975
Genome IDJYMV01032014
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5263
End posion on genome 5336
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccatgaatat
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGACTGGCAGTCAAGAGGTCGTCGGTTCGATC
CCGTCCGGCTCCACat
Downstream region at tRNA end position 
taattcctat
Secondary structure (Cloverleaf model)
>WENV170665975	Ala	GGC
                   t      ACat taattcctat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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