The detailed information of tRNA gene sequence


Sequence ID>WENV170666181
Genome IDJYMV01034246
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5201
End posion on genome 5115
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aaccatattt
tRNA gene sequence 
GCTCGGGTGGCGGAATTGGTAGACGCGCATGGTTCAGGTCCATGTGTTCGCAAGAACGTG
CTGGTTCAACTCCAGTCCCGAGTACGA
Downstream region at tRNA end position 
tctattcttt
Secondary structure (Cloverleaf model)
>WENV170666181	Leu	CAG
                   t      ACGA tctattcttt
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          T C
                    T     T G A C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTTCGCAAGAACGT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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