The detailed information of tRNA gene sequence


Sequence ID>WENV170666341
Genome IDJYMV01035994
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 11359
End posion on genome 11435
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaacactac
tRNA gene sequence 
AGGGGTGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGGGGGTTCGAG
TCCCTCCACCCCTGCCA
Downstream region at tRNA end position 
cttttcttgc
Secondary structure (Cloverleaf model)
>WENV170666341	Trp	CCA
                   c      GCCA cttttcttgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T T G       G G G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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