The detailed information of tRNA gene sequence


Sequence ID>WENV170666519
Genome IDJYMV01037906
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 7328
End posion on genome 7241
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgcgatata
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTAGGCTTAACCCCT
ACCGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
aaacttaatt
Secondary structure (Cloverleaf model)
>WENV170666519	Ser	GGA
                   a      Gttt aaacttaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGCTTAACCCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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