The detailed information of tRNA gene sequence


Sequence ID>WENV170666596
Genome IDJYMV01038583
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2341
End posion on genome 2432
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
acccagtatg
tRNA gene sequence
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTATCCTGAGAAATTGG
GATCGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position
ctcatatatc
Secondary structure (Cloverleaf model)
>WENV170666596	Ser	GCT
                   g      GCCG ctcatatatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATCCTGAGAAATTGGGATC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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