The detailed information of tRNA gene sequence


Sequence ID>WENV170666603
Genome IDJYMV01038666
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2305
End posion on genome 2229
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acccgcaaac
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCCCGAGTTCAAA
TCTCGGTCTCGCTACAA
Downstream region at tRNA end position 
caaaaaacca
Secondary structure (Cloverleaf model)
>WENV170666603	Met	CAT
                   c      ACAA caaaaaacca
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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