The detailed information of tRNA gene sequence


Sequence ID>WENV170666711
Genome IDJYMV01040034
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 4094
End posion on genome 4003
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagattgata
tRNA gene sequence 
GGAGAGATGGGTGAGTGGTTTAAACCAGTCGTTTGCTAAATGACCGTACGTGGAAACATG
TACCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taatttcatt
Secondary structure (Cloverleaf model)
>WENV170666711	Ser	GCT
                   a      GCCA taatttcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGTGGAAACATGTACC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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