The detailed information of tRNA gene sequence


Sequence ID>WENV170666836
Genome IDJYMV01041080
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 12784
End posion on genome 12710
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
nnnnnnntgc
tRNA gene sequence
GGTGAGGTAGTACAGTCCGGTAGTGCGTAGGCCTGCAAAGCCTGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtt
Downstream region at tRNA end position
tgatcttggt
Secondary structure (Cloverleaf model)
>WENV170666836	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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