The detailed information of tRNA gene sequence


Sequence ID>WENV170666940
Genome IDJYMV01042270
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 62666
End posion on genome 62576
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagagtatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atacaaaacc
Secondary structure (Cloverleaf model)
>WENV170666940	Ser	GGA
                   t      GCCA atacaaaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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