The detailed information of tRNA gene sequence


Sequence ID>WENV170666962
Genome IDJYMV01042453
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2360
End posion on genome 2271
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attcaaatcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGTAGACTCGAAATCTATTGTGCGTTCACGCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cacacacttc
Secondary structure (Cloverleaf model)
>WENV170666962	Ser	CGA
                   c      GCCA cacacacttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTGCGTTCACGCGTACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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