The detailed information of tRNA gene sequence


Sequence ID>WENV170667145
Genome IDJYMV01043959
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 6294
End posion on genome 6389
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cagtattatg
tRNA gene sequence 
GGGAATGATTGCGCGGCTGGTGCCCGCCGCGGTCTTCAAAACCGTTGTCCCGGTGCTGAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttgaaaaag
Secondary structure (Cloverleaf model)
>WENV170667145	SeC	TCA
                   g      GCCA tttgaaaaag
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       C G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        C     TGTCCCGGTGCTGAATCGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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