The detailed information of tRNA gene sequence


Sequence ID>WENV170667153
Genome IDJYMV01044041
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 3225
End posion on genome 3310
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actgattttT
tRNA gene sequence 
GCAGAGGTCGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCTGTGTTCGCAAGAACGCG
GGGGTTCAAATCCCTCTCTCTGCGTta
Downstream region at tRNA end position 
tttattttcc
Secondary structure (Cloverleaf model)
>WENV170667153	Ser	TGA
                   T      GTta tttattttcc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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