The detailed information of tRNA gene sequence


Sequence ID>WENV170667199
Genome IDJYMV01044554
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 358
End posion on genome 284
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttacagt
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtc
Downstream region at tRNA end position 
tttggtcttc
Secondary structure (Cloverleaf model)
>WENV170667199	Cys	GCA
                   t      TCtc tttggtcttc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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