The detailed information of tRNA gene sequence


Sequence ID>WENV170667200
Genome IDJYMV01044555
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 359
End posion on genome 285
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttacagt
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtc
Downstream region at tRNA end position 
ttatggtctt
Secondary structure (Cloverleaf model)
>WENV170667200	Cys	GCA
                   t      TCtc ttatggtctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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