The detailed information of tRNA gene sequence


Sequence ID>WENV170667231
Genome IDJYMV01044906
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 116082
End posion on genome 116156
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatagtaact
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGCCGCGAGTTCGAG
TCTCGTCAGTCCCGCtc
Downstream region at tRNA end position 
taaaaacccc
Secondary structure (Cloverleaf model)
>WENV170667231	Asp	GTC
                   t      GCtc taaaaacccc
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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