The detailed information of tRNA gene sequence


Sequence ID>WENV170667281
Genome IDJYMV01045585
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 9640
End posion on genome 9564
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaattttat
tRNA gene sequence 
GGCGGTGTAGCTCAGGTGGTTAGAGCATACGGCTCATATCCGTAGTGTCGGGGGTTCAAG
TCCCTCCACCGCTACCA
Downstream region at tRNA end position 
tataattata
Secondary structure (Cloverleaf model)
>WENV170667281	Met	CAT
                   t      ACCA tataattata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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