The detailed information of tRNA gene sequence


Sequence ID>WENV170667303
Genome IDJYMV01045662
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 347
End posion on genome 270
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtaccatac
tRNA gene sequence 
AGGAGCGTAGCTCAGTCTGGCCAGAGCGCTGGTCTCCAAAACCAGTGGTCGGGGGTTCGA
ATCCTCCCGCTCCTGCCA
Downstream region at tRNA end position 
cttttcaaag
Secondary structure (Cloverleaf model)
>WENV170667303	Trp	CCA
                   c      GCCA cttttcaaag
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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