The detailed information of tRNA gene sequence


Sequence ID>WENV170667376
Genome IDJYMV01046644
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 33759
End posion on genome 33684
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tggaaccact
tRNA gene sequence 
TGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
gagatgaata
Secondary structure (Cloverleaf model)
>WENV170667376	Trp	CCA
                   t      GCCA gagatgaata
                     T   T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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