The detailed information of tRNA gene sequence


Sequence ID>WENV170667414
Genome IDJYMV01047216
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 10138
End posion on genome 10061
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtaccatac
tRNA gene sequence 
AGGAGCGTAGCTCAGTCTGGCCAGAGCGCTGGTCTCCAAAACCAGTGGTCGGGGGTTCGA
ATCCTCCCGCTCCTGCCA
Downstream region at tRNA end position 
tttttcgtat
Secondary structure (Cloverleaf model)
>WENV170667414	Trp	CCA
                   c      GCCA tttttcgtat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK