The detailed information of tRNA gene sequence


Sequence ID>WENV170667497
Genome IDJYMV01048148
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 4985
End posion on genome 4896
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGGATGGGTGAGTGGTTGAAACCGACGGACTTGAAATCCGTTAAGGCTGCAAGGTCT
TCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
gcttttttaa
Secondary structure (Cloverleaf model)
>WENV170667497	Ser	TGA
                   n      GCCA gcttttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    T       A A C C
      T G A        G     TAAGGCTGCAAGGTCTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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