The detailed information of tRNA gene sequence


Sequence ID>WENV170667705
Genome IDJYMV01050538
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 6237
End posion on genome 6160
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgaatcctt
tRNA gene sequence 
GGACCGGTAGTTCAGTTTGGTTAGAACGCCGCCCTGTCACGGCGGAGGTCGCGAGTTCGA
GTCTCGTCCGGTCCGCCA
Downstream region at tRNA end position 
attttttgac
Secondary structure (Cloverleaf model)
>WENV170667705	Asp	GTC
                   t      GCCA attttttgac
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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