The detailed information of tRNA gene sequence


Sequence ID>WENV170667769
Genome IDJYMV01051318
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2855
End posion on genome 2940
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctttttagg
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTATAGCGCCGGCCTTGAAAGCCGGTGGGAATTTCCCTCGG
GGGTTCAAATCCCTCCCTCTGCGCCA
Downstream region at tRNA end position 
taagcgtcag
Secondary structure (Cloverleaf model)
>WENV170667769	Ser	TGA
                   g      GCCA taagcgtcag
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T T C G       G G G G G     C
    T         | | |                 T T
    G       T A G C
      G T A        G     TGGGAATTTCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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