The detailed information of tRNA gene sequence


Sequence ID>WENV170667837
Genome IDJYMV01052124
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 24353
End posion on genome 24441
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatctgtaaC
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCGTGATTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170667837	Ser	GGA
                   C      GAnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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