The detailed information of tRNA gene sequence


Sequence ID>WENV170667903
Genome IDJYMV01052802
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 3419
End posion on genome 3343
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttgccgatat
tRNA gene sequence 
GCCAGGGTAGCTCAGCCTGGGAGAGCACTCGGCTGAAGACCGAGCTGTCGCGCGTTCAAA
TCCCGCCTCTGGCACTA
Downstream region at tRNA end position 
atttttattg
Secondary structure (Cloverleaf model)
>WENV170667903	Phe	GAA
                   t      ACTA atttttattg
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     A
    C       C T C G       G C G C G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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