The detailed information of tRNA gene sequence


Sequence ID>WENV170667912
Genome IDJYMV01052917
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 14682
End posion on genome 14593
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcacatattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCGGCACCCTGCTAAGGTGTTTTAGGTGAAATATCC
TAACGTGGGTTCGAATCCCACCCCCTCCGCgt
Downstream region at tRNA end position 
agttagagag
Secondary structure (Cloverleaf model)
>WENV170667912	Ser	GCT
                   t      GCgt agttagagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A   C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTAGGTGAAATATCCTAAC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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