The detailed information of tRNA gene sequence


Sequence ID>WENV170668565
Genome IDLAHQ01001171
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 9004
End posion on genome 8929
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tccaaaagaa
tRNA gene sequence 
GGGCGCGTGGCCTAGTCAGGATAAGGCGGCAGCCTCCTAAGCTGTAGATCGGGGGTTCGA
ATCCCTCTGCGCCCGCtt
Downstream region at tRNA end position 
gctttttatt
Secondary structure (Cloverleaf model)
>WENV170668565	Arg	CCT
                   a      GCtt gctttttatt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  A         T C C G       G G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T A          G     AGATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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