The detailed information of tRNA gene sequence


Sequence ID>WENV170668573
Genome IDLAHQ01001697
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 433
End posion on genome 360
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
catacttcga
tRNA gene sequence 
GGGCCTGTGGTCTAGCTGGTTATGACATCGCCTTCACACGGCGGGGATCACGCGTTCGAA
TCGCGTCGGGCCCAtga
Downstream region at tRNA end position 
tcatttctgc
Secondary structure (Cloverleaf model)
>WENV170668573	Val	CAC
                   a      Atga tcatttctgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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