The detailed information of tRNA gene sequence


Sequence ID>WENV170668581
Genome IDLAHQ01002155
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 485
End posion on genome 411
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatctgttgT
tRNA gene sequence 
GTCCGGATGGTGTAGTGGCCCATCATGAAGGCCTGTCGAGCCTTCGACCCGGGTTCGAAT
CCCGGTCCGGGCGTtt
Downstream region at tRNA end position 
tatttcctgt
Secondary structure (Cloverleaf model)
>WENV170668581	Asp	GTC
                   T      GTtt tatttcctgt
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | +                 T T
    C       T C A T
      C C A        G     CGAC
                    A - T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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