The detailed information of tRNA gene sequence


Sequence ID>WENV170668599
Genome IDLAHQ01003563
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 677
End posion on genome 604
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcataaaaag
tRNA gene sequence 
GGGCTTGTAGCTTAGTTCGGCAGAGCGACGGACTCTTAATCCGTAGGTCAAGGGTTCAAA
TCCCTTCAGGCCCGttt
Downstream region at tRNA end position 
ctgcttttca
Secondary structure (Cloverleaf model)
>WENV170668599	Lys	CTT
                   g      Gttt ctgcttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    C       + | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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