The detailed information of tRNA gene sequence


Sequence ID>WENV170668612
Genome IDLAHQ01004431
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 3218
End posion on genome 3142
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCCCGTGGTCTAGGTGGTTATGACATCGCCCTTACACGGCGGGGATCACGCGTTCGAA
TCGCGTCGGGCCCATCA
Downstream region at tRNA end position 
gtccctcgtt
Secondary structure (Cloverleaf model)
>WENV170668612	Val	TAC
                   n      ATCA gtccctcgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      G G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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