The detailed information of tRNA gene sequence


Sequence ID>WENV170668615
Genome IDLAHQ01005063
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1517
End posion on genome 1443
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agatctgcct
tRNA gene sequence 
GCCCAGGTAGCTCAGTGGGAGAGCGCTGCCCTGAAGAGGCAGTTGTCCCCGGTTCGAATC
CGGGTCTGGGCACCA
Downstream region at tRNA end position 
aaaaaacagg
Secondary structure (Cloverleaf model)
>WENV170668615	Phe	GAA
                   t      ACCA aaaaaacagg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     C T C G       C C C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     TTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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