The detailed information of tRNA gene sequence


Sequence ID>WENV170668619
Genome IDLAHQ01005541
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1573
End posion on genome 1646
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gagcagaatT
tRNA gene sequence 
GGGCTTGTAGATCAGTGGTAGATCGCCGCCTTCGCAAGGCGGAGGCCACGGGTTCGAATC
CCGTCAAGTCCATag
Downstream region at tRNA end position 
acatcattta
Secondary structure (Cloverleaf model)
>WENV170668619	Ala	CGC
                   T      ATag acatcattta
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     G
      T     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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