The detailed information of tRNA gene sequence


Sequence ID>WENV170668646
Genome IDLAHQ01007990
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 815
End posion on genome 741
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCGCTGGTTCAATCC
CAGTACCGCCTACCA
Downstream region at tRNA end position 
ttttaaatcc
Secondary structure (Cloverleaf model)
>WENV170668646	Val	CAC
                   n      ACCA ttttaaatcc
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      + | | | |     A
      C     C T C A       G C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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