The detailed information of tRNA gene sequence


Sequence ID>WENV170668675
Genome IDLAHQ01012063
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5506
End posion on genome 5580
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agtagctgtT
tRNA gene sequence 
GGGCAGGTAGATCAGCTGGAAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAAAT
CCCGACCTGTCCATat
Downstream region at tRNA end position 
ctctcttttt
Secondary structure (Cloverleaf model)
>WENV170668675	Ala	GGC
                   T      ATat ctctcttttt
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    T       C T A G       T C G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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