The detailed information of tRNA gene sequence


Sequence ID>WENV170668680
Genome IDLAHQ01013888
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 253
End posion on genome 330
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caactcaaaT
tRNA gene sequence 
GGGCCCGTAGCTCAGACTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGCCCCGGGTTCAAA
TCCCGGTGGGTCCATCC
Downstream region at tRNA end position 
tattttaata
Secondary structure (Cloverleaf model)
>WENV170668680	Ala	TGC
                   T      ATCC tattttaata
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T          T A
                    T     G G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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